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Friday 28 March 2014

Biological testing tool, Scan-Drop, tests in fraction of time and cost of industry standard

Biological testing tool, Scan-Drop, tests in fraction of time and cost of industry standard

A single instrument that can conduct a wide range of biological scans in a fraction of the time and cost of industry standard equipment has been developed. It uses considerably less material and ultra-sensitive detection methods to do the same thing. Scan Drop, is a portable instrument no bigger than a shoebox that has the capacity to detect a variety of biological specimen. For that reason it will benefit a wide range of users beyond the medical community, including environmental monitoring and basic scientific research.

North-eastern University professor of pharmaceutical sciences, Tania Konry, has developed a single instrument that can conduct a wide range of biological scans in a fraction of the time and cost of industry standard equipment. That's because it uses considerably less material and ultra-sensitive detection methods to do the same thing.
Currently, researchers face enormous time constraints and financial hurdles from having to run these analyses on a regular basis. Hundreds of dollars and 24 hours are what's required to scan biological materials for important bio-markers that signal diseases such as diabetes or cancer. And suppose you wanted to monitor live cancer cells. For that you'd have to use an entirely different method. It takes just as long but requires a whole other set of expensive top-end instrumentation. Want to look at bacteria instead? Be prepared to wait a few days for it to grow before you can get a meaningful result.

Konry's creation, ScanDrop, is a portable instrument no bigger than a shoebox that has the capacity to detect a variety of biological specimen. For that reason it will benefit a wide range of users beyond the medical community, including environmental monitoring and basic scientific research.

The instrument acts as a miniature science lab, of sorts. It contains a tiny chip, made of polymer or glass, that is connected to equally tiny tubes. An extremely small-volume liquid sample-whether it's water or a biological fluid such as serum-flows in one of those tubes, through the lab-on-a-chip device, and out the other side. While inside, the sample is exposed to a slug of microscopic beads fictionalized to react with the lab test's search parameters. For example, one type of bead could be covered with antibodies that selectively bind to e. coli to test water quality. Other types could detect cancer bio-markers or bind to the tetanus virus to test for immunity.
"It can be any biological agent," Konry said. "We take the same approach."
The beads fluoresce when the specific marker or cell in question has been detected; from there, an analysis by Scan-Drop can provide the concentration levels of that marker or cell.

Because the volumes being tested with Scan Drop are so small, the testing time dwindles to just minutes. This means you could get near-real time measures of a changing sample-be it bacteria levels in a flowing body of water or dynamic insulin levels in the bloodstream of a person with diabetes.

Konry noted that not only are other testing mechanisms prohibitively expensive, but they are also fairly useless in the field-particularly in remote areas-because the instruments are large and require long times for analysis. By comparison, Scan Drop's portability makes it much more functional and efficient in the field.
Her team recently joined forces with a group at the University of California at Berkeley, which developed software that can remotely control Scan Drop's activity from anywhere on the planet.

 This functionality could be particularly useful when the instrument is set up in the field to continuously monitor the environment. The achievement, Konry said, adds yet another level of efficiency to the system. 


Thursday 27 March 2014

Preoperative PET cuts unnecessary lung surgeries in half

Preoperative PET cuts unnecessary lung surgeries in half

PET changed patient management in 50 percent of lung cancer cases, a comprehensive statistical analysis reveals. Few studies have been able to pin down exactly what impact preoperative PET has on clinical decision-making and resulting treatment. Preliminary review of the data from this long-term, observational study was inconclusive, but after a more thorough statistical analysis accounting for selection bias and other confounding factors, the researchers were able to conclude that PET imaging eliminated approximately half of unnecessary surgeries.

New quantitative data suggests that 30 percent of the surgeries performed for non-small cell lung cancer patients in a community-wide clinical study were deemed unnecessary. Additionally, positron emission tomography (PET) was found to reduce unnecessary surgeries by 50 percent, according to research published in the March issue of the Journal of Nuclear Medicine.

PET imaging prior to surgery helps stage a patient's disease by providing functional images of tumors throughout the body, especially areas where cancer has spread, otherwise known as metastasis. Few studies have been able to pin down exactly what impact preoperative PET has on clinical decision-making and resulting treatment. Preliminary review of the data from this long-term, observational study of an entire community of veterans was inconclusive about the utility of PET, but after a more thorough statistical analysis accounting for selection bias and other confounding factors, the researchers were able to conclude that PET imaging eliminated approximately half of unnecessary surgeries.

"It has become standard of care for lung cancer patients to receive preoperative PET imaging," said Steven Zeliadt, PhD, lead author of the study conducted at VA Puget Sound Health Care System and associate professor for the University of Washington in Seattle, Wash. "The prevailing evidence reinforces the general understanding within the medical community that PET is very useful for identifying occult metastasis and that it helps get the right people to surgery while avoiding unnecessary surgeries for those who would not benefit."

For this study, researchers reviewed newly diagnosed non-small lung cancer patients who received preoperative PET to assess the real-life effectiveness of PET as a preventative measure against unnecessarily invasive treatment across a community of patients. A total of 2,977 veterans who underwent PET during disease staging from 1997 to 2009 were included in the study. Of these, 976 patients underwent surgery to respect their lung cancer. During surgery or within 12 months of surgery, 30 percent of these patients were found to have advanced-stage metastatic disease, indicating an unnecessary surgery.

Interestingly, the use of PET increased during the study period from 9% to 91%. Conventional multivariate analyses was followed by instrumental variable analyses to account for unobserved anomalies, such as when patients did not undergo PET when it would have been clinically recommended to do so. This new data has the potential to change policy and recommendations regarding the use of oncologic PET for more accurate tumor staging.

"We will likely build more quality measures around this research so that preoperative PET is more strongly recommended to improve the management of care for these patients," added Zeliadt.


Wednesday 19 March 2014

Archaeologists discover earliest complete example of a human with cancer, from 3,000 years ago

Archaeologists discover earliest complete example of a human with cancer, from 3,000 years ago

Archaeologists have found the oldest complete example in the world of a human with metastatic cancer in a 3,000 year-old skeleton. The skeleton of the young adult male was found in a tomb in modern Sudan in 2013 and dates back to 1200BC. Analysis has revealed evidence of metastatic carcinoma, cancer which has spread to other parts of the body from where it started, from a malignant soft-tissue tumour spread across large areas of the body, making it the oldest convincing complete example of metastatic cancer in the archaeological record.
Archaeologists have found the oldest complete example in the world of a human with metastatic cancer in a 3,000 year-old skeleton.

The skeleton of the young adult male was found by a Durham University PhD student in a tomb in modern Sudan in 2013 and dates back to 1200BC.
Analysis has revealed evidence of metastatic carcinoma, cancer which has spread to other parts of the body from where it started, from a malignant soft-tissue tumour spread across large areas of the body, making it the oldest convincing complete example of metastatic cancer in the archaeological record.

The researchers from Durham University and the British Museum say the discovery will help to explore underlying causes of cancer in ancient populations and provide insights into the evolution of cancer in the past. Ancient DNA analysis of skeletons and mummies with evidence of cancer can be used to detect mutations in specific genes that are known to be associated with particular types of cancer.

Even though cancer is one of the world's leading causes of death today, it remains almost absent from the archaeological record compared to other pathological conditions, giving rise to the conclusion that the disease is mainly a product of modern living and increased longevity. These findings suggest that cancer is not only a modern disease but was already present in the Nile Valley in ancient times.

Lead author, Michaela Binder, a PhD student in the Department of Archaeology at Durham University, excavated and examined the skeleton. She said: "Very little is known about the antiquity, epidemiology and evolution of cancer in past human populations apart from some textual references and a small number of skeletons with signs of cancer.
"Insights gained from archaeological human remains like these can really help us to understand the evolution and history of modern diseases.
"Our analysis showed that the shape of the small lesions on the bones can only have been caused by a soft tissue cancer even though the exact origin is impossible to determine through the bones alone."

The skeleton is of an adult male estimated to be between 25-35 years old when he died and was found at the archaeological site of Amara West in northern Sudan, situated on the Nile, 750km downstream of the country's modern capital Khartoum. It was buried extended on his back, within a badly deteriorated painted wooden coffin, and provided with a glazed faience amulet as a grave good.

Previously, there has only been one convincing, and two tentative, examples of metastatic cancer predating the 1st millennium BC reported in human remains. However, because the remains derived from early 20th century excavations, only the skulls were retained, thus making a full re-analysis of each skeleton, to generate differential (possible) diagnoses, impossible.
Co-author, Dr Neal Spencer from the Department of Ancient Egypt and Sudan at the British Museum, said: "From footprints left on wet mud floors, to the healed fractures of many ancient inhabitants, Amara West offers a unique insight into what it was like to live there -- and die -- in Egyptian-ruled Upper Nubia 3200 years ago."

The skeleton was examined by experts at Durham University and the British Museum using radiography and a scanning electron microscope (SEM) which resulted in clear imaging of the lesions on the bones. It showed cancer metastases on the collar bones, shoulder blades, upper arms, vertebrae, ribs, pelvis and thigh bones.

The cause of the cancer can only be speculative but the researchers say it could be as a result of environmental carcinogens such as smoke from wood fires, through genetic factors, or from infectious diseases such as schistosomiasis which is caused by parasites.

They say that an underlying schistosomiasis infection seems a plausible explanation for the cancer in this individual as the disease had plagued inhabitants of Egypt and Nubia since at least 1500BC, and is now recognised as a cause of bladder cancer and breast cancer in men.
Michaela Binder added: "Through taking an evolutionary approach to cancer, information from ancient human remains may prove a vital element in finding ways to address one of the world's major health problems."

The tomb, where the skeleton was found, appears to have been used for high-status individuals from the town, but not the ruling elite, based on the tomb architecture and aspects of funerary ritual.

The tomb's architecture is evidence of a hybrid culture blending Pharaonic elements (burial goods, painted coffins) with Nubian culture (a low mound to mark the tomb).
The well preserved pottery recovered from the tomb provides a date within the 20th Dynasty (1187-1064BC), a period when Egypt ruled Upper Nubia, endured conflicts with Libya and while pharaohs such as Ramses III were being buried in the Valley of the Kings.